PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D13G0320
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 138aa    MW: 15976.3 Da    PI: 8.7511
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D13G0320genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.83.5e-115195549
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49
                 ++ +rk +NRe+ArrsR RKk+ ++ L+ +  +L + N++ +  l
  Gh_D13G0320 51 RKRKRKVSNRESARRSRMRKKKHLDDLTAELTQLREDNHQIILSL 95
                 6789**********************************9877554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.4E-1347111IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.1284991IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.7E-1049126No hitNo description
SuperFamilySSF579593.31E-1151102No hitNo description
PfamPF001709.3E-95192IPR004827Basic-leucine zipper domain
CDDcd147021.52E-1552102No hitNo description
PROSITE patternPS0003605469IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    Send to blast
MSQILSETFL SGFMILVQSL SVVFLYCGTS SGASTVTQVS EELQALLMEE RKRKRKVSNR  60
ESARRSRMRK KKHLDDLTAE LTQLREDNHQ IILSLNITSQ SYLHVEAENS VLRAQTNELS  120
CRLQSLEDII TFLQWKQW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15055RKRKRK
25371KRKVSNRESARRSRMRKKK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012461770.12e-74PREDICTED: ocs element-binding factor 1-like
SwissprotQ9LZP87e-24BZP53_ARATH; bZIP transcription factor 53
TrEMBLA0A0D2S7S32e-95A0A0D2S7S3_G
STRINGGLYMA04G01210.18e-38(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM50128154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.11e-35basic leucine-zipper 44